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DC Field | Value | Language |
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dc.contributor.author | Łukasz, Golon | - |
dc.contributor.author | Adam K., Sieradzan | - |
dc.date.accessioned | 2023-04-20T07:50:47Z | - |
dc.date.available | 2023-04-20T07:50:47Z | - |
dc.date.issued | 2022 | - |
dc.identifier.uri | https://link.springer.com/article/10.1007/s11696-022-02634-x | - |
dc.identifier.uri | https://dlib.phenikaa-uni.edu.vn/handle/PNK/8157 | - |
dc.description | CC BY | vi |
dc.description.abstract | Nucleic acids are one of the most important cellular components. These molecules have been studied both experimentally and theoretically. As all-atom simulations are still limited to short time scales, coarse-grain modeling allows to study of those molecules on a longer time scale. Nucleic-Acid united RESidue (NARES-2P) is a low-resolution coarse-grained model with two centers of interaction per repeating unit. It has been successfully applied to study DNA self-assembly and telomeric properties. This force field enables the study of nucleic acids Behavior on a long time scale but lacks atomistic details. In this article, we present new software to reconstruct atomistic details from the NARES-2P model. It has been applied to RNA pseudoknot, nucleic acid four-way junction, G-quadruplex and DNA duplex converted to NARES-2P model and back. Moreover, it was applied to DNA structure folded and self-assembled with NARES-2P. | vi |
dc.language.iso | en | vi |
dc.publisher | Springer | vi |
dc.subject | DNA self-assembly | vi |
dc.subject | NARES-2P | vi |
dc.title | NARall: a novel tool for reconstruction of the all-atom structure of nucleic acids from heavily coarse-grained model | vi |
dc.type | Book | vi |
Appears in Collections | OER - Khoa học Tự nhiên |
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